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Targeting c-Met and EMT, PI3K/Akt/mTOR/MEK signaling with Dihydropyrimidinone-Piperazine-based scaffold that triggers apoptosis, autophagy, and paraptosis in breast carcinomas - 04/02/26

Doi : 10.1016/j.biopha.2026.119059 
Monisha Yadav H S a, 1 , Young Yun Jung b, 1 , Narasimha M. Beeraka c, g, , Bhoomika B R a , Doddahosuru M. Gurudatt a , Keshav Kumar Harish d , Mahendra Madegowda d , Santosh L. Gaonkar e , Shreeja Basappa f , Vladimir N. Nikolenko c , Riyaz Ali M. Osmani h , Kanchugarakoppal S. Rangappa a , Basappa Basappa a, , Kwang Seok Ahn b,
a Laboratory of Chemical Biology, Department of Studies in Organic Chemistry, University of Mysore, Mysore, Karnataka 570006, India 
b Department of Science in Korean Medicine, College of Korean Medicine, Kyung Hee University, 24 Kyungheedae-ro, Dongdaemun-gu, Seoul 02447, Republic of Korea 
c Department of Human Anatomy and Histology, I.M. Sechenov First Moscow State Medical University of the Ministry of Health of the Russian Federation (Sechenov University), 8/2 Trubetskaya Str., Moscow 119991, Russia 
d Department of Studies in Physics, University of Mysore, Mysore, Karnataka 570006, India 
e Department of Chemistry, Manipal Institute of Technology, Manipal Academy of Higher Education, Manipal, Karnataka, India 
f Department of Chemistry, BITS-Pilani Hyderabad Campus, Jawahar Nagar, Medchal 500078, India 
g Saveetha institute of Basic medical sciences (SIBMS) Saveetha Institute of Medical and Technical Sciences, Saveetha University, Chennai, Tamil Nadu 600077, India 
h Department of Pharmaceutics, College of Pharmacy, King Khalid University (KKU), Al Faraa, Abha 62223, Saudi Arabia 

Corresponding author at: Department of Human Anatomy and Histology, I.M. Sechenov First Moscow State Medical University of the Ministry of Health of the Russian Federation (Sechenov University), 8/2 Trubetskaya Str., Moscow 119991, Russia. Department of Human Anatomy and Histology, I.M. Sechenov First Moscow State Medical University of the Ministry of Health of the Russian Federation (Sechenov University) 8/2 Trubetskaya Str Moscow 119991 Russia ⁎⁎ Corresponding authors.

Abstract

Background

The development of targeted anticancer agents capable of selectively eliminating breast cancer cells while sparing normal tissues remains a critical therapeutic challenge. MCB-04, a novel dihydropyrimidinone (DHPM)-tethered piperazine derivative synthesized via a TiO₂ nanoparticle-mediated catalytic strategy, demonstrates promising anticancer potential.

Objectives

This study aimed to synthesize DHPM-tethered piperazine derivatives using a TiO₂-catalyzed approach and to comprehensively evaluate the cytotoxic efficacy of the lead compound MCB-04 against human breast cancer cells, with particular emphasis on elucidating its underlying molecular mechanisms of cell death.

Methods

A library of DHPM-tethered piperazine derivatives was synthesized and characterized, and MCB-04 was identified as the lead compound. Cytotoxicity was assessed using the MTT assay in MDA-MB-231, MCF-7, BT-474, and SK-BR-3 breast cancer cell lines, as well as normal MCF-10A cells. Apoptosis and autophagy were analyzed by live/dead assays, Annexin V/PI staining, immunocytochemistry, and Western blotting. Mitochondrial dysfunction and oxidative stress were evaluated by measuring mitochondrial membrane potential (Δψm) and intracellular ROS levels using flow cytometry. The involvement of paraptosis and c-Met–mediated signaling pathways was further investigated.

Results

MCB-04 exhibited potent and selective cytotoxicity toward breast cancer cells, with the highest sensitivity observed in MDA-MB-231 cells (IC50 = 20 µM), while exerting minimal toxicity in normal MCF-10A cells. MCB-04 treatment significantly increased intracellular ROS levels and disrupted Δψm, indicating mitochondrial dysfunction. Mechanistically, MCB-04 induced apoptosis through activation of cleaved PARP and cleaved caspase-3, an increased Bax/Bcl-2 ratio, and upregulation of p53 and phosphorylated p53. Concurrently, autophagy was evidenced by LC3-II accumulation and increased Atg5 and Beclin-1 expression. Markers of ER stress-mediated paraptosis, including ATF4 and CHOP, were also elevated with concomintant decline in Alix. Furthermore, MCB-04 markedly suppressed phosphorylated c-Met, EMT-related VEGF, MMP-9 expression and downstream PI3K/Akt/mTOR/MEK signaling pathways.

Conclusion

MCB-04 exerts robust anti-breast cancer activity by triggering multiple programmed cell death pathways include apoptosis, autophagy, and paraptosis primarily through ROS-mediated mitochondrial dysfunction and inhibition of c-Met-dependent oncogenic signaling. These findings position MCB-04 as a promising multi-targeted therapeutic candidate, warranting further in vivo validation and preclinical development for breast cancer treatment.

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Graphical Abstract




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Highlights

First synthesis of DHP-piperazine using TiO2 nanoparticle catalysis.
MCB-04 shows strong anticancer activity via apoptosis, autophagy and paraptosis.
MCB-04 targets PI3K/Akt/mTOR and c-Met signaling pathways.
MCB-04 inhibits EMT (via c-Met) to block invasion and metastasis in breast cancer.
Novel MCB-04 compound offers promise as a breast cancer therapeutic agent.

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Keywords : Apoptosis, Autophagy, Biginelli reaction, Breast cancers, C-Met signaling pathway, Dihydropyrimidinones, Paraptosis


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Vol 195

Article 119059- février 2026 Retour au numéro
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