Suscribirse

Multi-library synchronization for suspect screening using LC-HRMS: The importance of InChIkeys - 15/08/22

Doi : 10.1016/j.toxac.2022.06.165 
Petur W. Dalsgaard , Christian B. Mollerup, Daniel Pasin
 University of copenhagen, Section of forensic chemistry, Copenhagen, Denmark 

Corresponding author.

Bienvenido a EM-consulte, la referencia de los profesionales de la salud.
Artículo gratuito.

Conéctese para beneficiarse!

Resumen

Aim

To generate two major LC-HRMS semi-targeted screening libraries in addition to the in-house targeted library: (1) an extended general toxicology library by synchronizing an in-house targeted library with compounds found in Baselt's 12th Edition of Disposition of Toxic Drugs and Chemicals in Man, and (2) the extended general toxicology library synchronized with HighResNPS, a comprehensive database of NPS.

Method

Firstly, InChiKeys for the compounds (n=1765) in the Waters Forensic Toxicology Screening Library (i.e. the targeted Library) were extracted in addition to the observed retention times and product ions. Secondly, compounds listed in Baselt (n=2057) were extracted from the contents and then converted to simplified molecular-input line-entry system (SMILES) strings and InChIKeys using Python's cheminformatics package, rdkit. Compounds which were not suited for LC-ESI-MS analysis, such as volatiles and elements, and compounds with masses either less than 50Da or greater than 1,000Da were removed. The precursor ion masses of the remaining compounds were calculated from the SMILES string. Lastly, the January 2022 library was downloaded from HighResNPS (n=2166), which contained InChIKeys and, both observed (n=351) and predicted (n=1815) retention times. Using the connectivity layer of the InChIKey, i.e. the first 14 characters, the target library and the Baselt library were combined so that only the unique compounds from each library were included to create the Baselt semi-target library. Similarly, the Baselt semi-target library was then combined with the HighResNPS library to create the HighResNPS semi-target library. These libraries were then converted to a Waters Corporation UNIFI library format (.ulc) and applied to special cases submitted in 2021–2022.

Results

The Baselt semi-target library consisted of 2690 compounds of which 925 were unique to the Baselt library while the HighResNPS semi-targeted library consisted of 4242 compounds of which, 1552 were unique to the HighResNPS library. The application of the Baselt semi-target library to selected special cases resulted in the detection of compounds like vortioxetine, darunavir, abacavir, zonisamide, drotaverine and brexpiprazole were detected in blood. Similarly, 3-Me-PCPy and 5F-3,5-AB-PFUPPYCA were detected in seized material using the HighResNPS semi-target library.

The use of only the in-house targeted libraries would have missed these relevant compounds in both forensic toxicology and forensic chemistry contexts. The use of InChIKeys rather than compound names or other standard identifiers made it easy to identify the unique compounds in each of the selected libraries with little effort and thus increased the scope by 52% and 140% relative to the target library.

Conclusion

Inclusion of InChIKeys in target libraries offers the possibility for laboratories to synchronize their libraries with libraries from other laboratories to broaden their screening capacity.

El texto completo de este artículo está disponible en PDF.

Esquema


© 2022  Publicado por Elsevier Masson SAS.
Añadir a mi biblioteca Eliminar de mi biblioteca Imprimir
Exportación

    Exportación citas

  • Fichero

  • Contenido

Vol 34 - N° 3S

P. S105 - septembre 2022 Regresar al número
Artículo precedente Artículo precedente
  • The systematic investigation of the role of adulterants into the postmortem redistribution of heroin
  • Nebile Daglioglu, Ismail Ethem Gören, Yusuf Kenan Daglioglu, Asli Atasoy, Pinar Efeoglu Ozseker
| Artículo siguiente Artículo siguiente
  • Quantification of phosphatidylethanol combining dried blood spots sampling with Orbitrap-based LC-HRMS platform: Method validation and proficiency testing
  • Julien Déglon, Timothée Joye, Estelle Lauer, Aurélien Thomas, Marc Augsburger

Bienvenido a EM-consulte, la referencia de los profesionales de la salud.

@@150455@@ Voir plus

Mi cuenta


Declaración CNIL

EM-CONSULTE.COM se declara a la CNIL, la declaración N º 1286925.

En virtud de la Ley N º 78-17 del 6 de enero de 1978, relativa a las computadoras, archivos y libertades, usted tiene el derecho de oposición (art.26 de la ley), el acceso (art.34 a 38 Ley), y correcta (artículo 36 de la ley) los datos que le conciernen. Por lo tanto, usted puede pedir que se corrija, complementado, clarificado, actualizado o suprimido información sobre usted que son inexactos, incompletos, engañosos, obsoletos o cuya recogida o de conservación o uso está prohibido.
La información personal sobre los visitantes de nuestro sitio, incluyendo su identidad, son confidenciales.
El jefe del sitio en el honor se compromete a respetar la confidencialidad de los requisitos legales aplicables en Francia y no de revelar dicha información a terceros.


Todo el contenido en este sitio: Copyright © 2026 Elsevier, sus licenciantes y colaboradores. Se reservan todos los derechos, incluidos los de minería de texto y datos, entrenamiento de IA y tecnologías similares. Para todo el contenido de acceso abierto, se aplican los términos de licencia de Creative Commons.