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Natural compounds as epigenetic modulators in gynaecological cancers: From chemoresistance to precision oncology - 18/08/26

Doi : 10.1016/j.biopha.2026.119777 
Prakash Lingasamy a, e, g, 1, Blessy Kiruba f, 1, Santhosh Rajakumar a, Suhas Manikant Surisetti f, Naisarg Patel a, f, Sajitha Lulu S f, Andres Salumets a, b, c, d, , Vijayachitra Modhukur a, d,
a Celvia CC AS, Tartu 50411, Estonia 
b Division of Obstetrics and Gynaecology, Department of Clinical Science, Intervention and Technology, Karolinska Institutet, Stockholm, Sweden 
c Department of Gynaecology and Reproductive Medicine, Karolinska University Hospital, Stockholm, Sweden 
d Department of Obstetrics and Gynaecology, Institute of Clinical Medicine, University of Tartu, Tartu, Estonia 
e Laboratory of Precision and Nanomedicine, Institute of Biomedicine and Translational Medicine, University of Tartu, Tartu 50411, Estonia 
f Integrated Multiomics Laboratory, School of Bio Sciences and Technology, Vellore Institute of Technology, Vellore, Tamil Nadu 632014, India 
g Nalam Biosciences OÜ, Tartu, Estonia 

Corresponding author at: Division of Obstetrics and Gynaecology, Department of Clinical Science, Intervention and Technology, Karolinska Institutet, Stockholm, Sweden. Division of Obstetrics and Gynaecology, Department of Clinical Science, Intervention and Technology, Karolinska Institutet Stockholm Sweden ⁎⁎ Correspondence to: Department of Obstetrics and Gynaecology, Institute of Clinical Medicine, University of Tartu, Tartu 50406, Estonia. Department of Obstetrics and Gynaecology, Institute of Clinical Medicine, University of Tartu Tartu 50406 Estonia

Abstract

Background

Gynaecological cancers, including ovarian, cervical, and endometrial malignancies, remain major causes of cancer-related morbidity and mortality because of tumour heterogeneity, recurrence, and therapeutic resistance. Epigenetic dysregulation, involving aberrant DNA methylation, altered histone modifications, dysregulated non-coding RNAs, and N⁶-methyladenosine (m⁶A) RNA remodelling, contributes to these processes. Direct evidence that natural compounds modulate m⁶A machinery in gynaecological cancers remains absent and is considered a knowledge gap.

Methods

We synthesised evidence on epigenetic alterations in gynaecological cancers and critically evaluated dietary and plant-derived compounds as candidate epigenetic modulators, focusing on preclinical mechanistic studies, pharmacokinetic data, selected early-phase clinical studies, and computational approaches to compound discovery and biomarker stratification.

Results

Natural agents, including curcumin, epigallocatechin-3-gallate, sulforaphane, berberine, resveratrol, genistein, diindolylmethane, quercetin, capsaicin, and butyrate, have been reported, mainly in preclinical models, to modulate DNA methyltransferases, histone deacetylases, microRNA networks, tumour suppressor gene expression, and chemosensitivity. However, translation is limited by poor bioavailability, pharmacokinetic variability, insufficient tumour-tissue target-engagement data, weak potency compared with approved epigenetic drugs, limited patient-derived model validation, and a lack of biomarker-driven trials. Compound-specific evidence remains uneven, with stronger support for selected chemosensitising mechanisms than for direct clinical epigenetic efficacy.

Conclusions

Natural compounds are mechanistically plausible but clinically under-validated adjunctive epigenetic modulators. Future development requires standardised formulations, improved delivery systems, tumour-tissue pharmacodynamic validation, multi-omics profiling, patient stratification, and biomarker-guided clinical trials to define their realistic role in precision gynaecological oncology. The proposed translational framework may support rational prioritisation of candidates for future preclinical and clinical testing.

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Graphical Abstract




 : 

Natural compounds as candidate adjunctive epigenetic modulators that may contribute to chemosensitisation in gynaecological cancers. The left panel depicts a chemoresistant gynaecological cancer cell, representing cervical, endometrial, or ovarian cancer, characterised by promoter hypermethylation, histone deacetylation, and miRNA/lncRNA dysregulation, collectively impairing apoptosis and increasing drug efflux. The centre panel shows selected natural epigenetic modulators, including curcumin, sulforaphane, berberine, and EGCG, linked to reported compound-specific mechanisms including HDAC1/2 inhibition and p53 acetylation, MEG3/miR-214 modulation, miR-9–5p/BRCA1 modulation, miR-30a-3p-mediated ERCC1/ATP7A downregulation, MLH1 demethylation and re-expression, and DNMT/DNMT1 or survival-signalling modulation. The right panel illustrates the resulting re-sensitised cancer cell phenotype, characterised by restored tumour suppressor gene expression, reduced drug efflux, increased apoptosis, and improved sensitivity to cisplatin and paclitaxel.


Natural compounds as candidate adjunctive epigenetic modulators that may contribute to chemosensitisation in gynaecological cancers. The left panel depicts a chemoresistant gynaecological cancer cell, representing cervical, endometrial, or ovarian cancer, characterised by promoter hypermethylation, histone deacetylation, and miRNA/lncRNA dysregulation, collectively impairing apoptosis and increasing drug efflux. The centre panel shows selected natural epigenetic modulators, including curcumin, sulforaphane, berberine, and EGCG, linked to reported compound-specific mechanisms including HDAC1/2 inhibition and p53 acetylation, MEG3/miR-214 modulation, miR-9–5p/BRCA1 modulation, miR-30a-3p-mediated ERCC1/ATP7A downregulation, MLH1 demethylation and re-expression, and DNMT/DNMT1 or survival-signalling modulation. The right panel illustrates the resulting re-sensitised cancer cell phenotype, characterised by restored tumour suppressor gene expression, reduced drug efflux, increased apoptosis, and improved sensitivity to cisplatin and paclitaxel.

Le texte complet de cet article est disponible en PDF.

Highlights

Natural compounds may reprogram epigenetic silencing in gynaecological cancer.
The 5R Framework supports precision epigenomic trial design.
m6A modulation by natural compounds remains clinically unvalidated.
AI-enabled multi-omics may guide biomarker-driven patient stratification.
Tumour-tissue PK/PD validation is essential for clinical translation.

Le texte complet de cet article est disponible en PDF.

Keywords : Epigenetics, Phytochemicals, Gynaecological cancer, Chemoresistance, DNA methylation, Non-coding RNA, Precision oncology


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