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Beta-lactam-induced immediate hypersensitivity reactions: A genome-wide association study of a deeply phenotyped cohort - 05/05/21

Doi : 10.1016/j.jaci.2020.10.004 
Paola Nicoletti, MD, PhD a, b, Daniel F. Carr, PhD c, Sarah Barrett, BSc c, Laurence McEvoy, BSc c, Peter S. Friedmann, FRCP d, Neil H. Shear, MD, FRCPC e, v, Matthew R. Nelson, PhD f, Anca M. Chiriac, MD g, Natalia Blanca-López, MD, PhD h, José A. Cornejo-García, PhD i, Francesco Gaeta, MD, PhD j, Alla Nakonechna, MD k, Maria J. Torres, MD, PhD i, l, Cristiano Caruso, MD j, Rocco L. Valluzzi, MD m, Aris Floratos, PhD n, o, Yufeng Shen, PhD n, Rebecca K. Pavlos, PhD p, Elizabeth J. Phillips, MD q, r, Pascal Demoly, MD g, s, Antonino Romano, MD t, u, Miguel Blanca, MD l, Munir Pirmohamed, FRCP, PhD c, k,
a Icahn School of Medicine at Mount Sinai, New York, NY 
b Sema4, Stamford, Conn 
c Department of Molecular and Clinical Pharmacology, University of Liverpool, Liverpool, United Kingdom 
d Dermatology Unit, Sir Henry Wellcome Research Laboratories, School of Medicine, University of Southampton, Southampton, United Kingdom 
e Division of Dermatology, Department of Medicine, University of Toronto, Toronto, Ontario, Canada 
f Deerfield, New York, NY 
g Division of Allergy, Hôpital Arnaud de Villeneuve, University Hospital of Montpellier, Montpellier, France 
h Infanta Leonor University Hospital, Madrid, Spain 
i Allergy Research Group, Allergy Research Group, Instituto de Investigación Biomédica de Málaga-IBIMA, ARADyAL, Malaga, Spain 
j Allergy Unit, Columbus Hospital, Fondazione Policlinico Universitario Agostino Gemelli, Istituto di Ricovero e Cura a Carattere Scientifico, Rome, Italy 
k Liverpool University Hospitals Foundation National Health Service Trust, Liverpool, United Kingdom 
l Allergy Unit, Hospital Regional Universitario de Málaga, Malaga, Spain 
m Division of Allergy, University Department of Pediatrics, Pediatric Hospital Bambino Gesù, Rome, Italy 
n Department of Systems Biology, New York, NY 
o Department of Biomedical Informatics, Columbia University, New York, NY 
p Wesfarmers Centre for Vaccines and Infectious Diseases, Telethon Kids Institute, University of Western Australia, Nedlands, Australia 
q Department of Medicine, Vanderbilt University Medical Center, Nashville, Tenn 
r Centre for Clinical Pharmacology and Infectious Diseases, Institute for Immunology and Infectious Diseases, Murdoch University, Murdoch, Australia 
s Unité Mixte de Recherche en Santé (UMR-S) 1136 Institut National de la Santé et de la Recherche Médicale–Sorbonne Université, Equipe Epidemiology of allergic and respiratory diseases (EPAR)– Louis d'Epidémiologie et de Santé Publique (IPLESP), Paris, France 
t Istituto di Ricovero e Cura a Carattere Scientifico Oasi Maria SS, Troina, Italy 
u Fondazione Mediterranea GB Morgagni, Catania, Italy 
v Division of Dermatology, Department of Medicine, Sunnybrook Health Sciences Centre, Toronto, Ontario, Canada 

Corresponding author: Munir Pirmohamed, FRCP, PhD, The Wolfson Centre for Personalised Medicine, Institute of Translational Medicine, University of Liverpool, Block A: Waterhouse Building, 1-5 Brownlow Street, Liverpool, L69 3GL, UK.The Wolfson Centre for Personalised MedicineInstitute of Translational MedicineUniversity of LiverpoolBlock A: Waterhouse Building1-5 Brownlow StreetLiverpoolL69 3GLUK

Abstract

Background

β-lactam antibiotics are associated with a variety of immune-mediated or hypersensitivity reactions, including immediate (type I) reactions mediated by antigen-specific IgE.

Objective

We sought to identify genetic predisposing factors for immediate reactions to β-lactam antibiotics.

Methods

Patients with a clinical history of immediate hypersensitivity reactions to either penicillins or cephalosporins, which were immunologically confirmed, were recruited from allergy clinics. A genome-wide association study was conducted on 662 patients (the discovery cohort) with a diagnosis of immediate hypersensitivity and the main finding was replicated in a cohort of 98 Spanish cases, recruited using the same diagnostic criteria as the discovery cohort.

Results

Genome-wide association study identified rs71542416 within the Class II HLA region as the top hit (P = 2 × 10−14); this was in linkage disequilibrium with HLA-DRB1∗10:01 (odds ratio, 2.93; P = 5.4 × 10−7) and HLA-DQA1∗01:05 (odds ratio, 2.93, P = 5.4 × 10−7). Haplotype analysis identified that HLA-DRB1∗10:01 was a risk factor even without the HLA-DQA1∗01:05 allele. The association with HLA-DRB1∗10:01 was replicated in another cohort, with the meta-analysis of the discovery and replication cohorts showing that HLA-DRB1∗10:01 increased the risk of immediate hypersensitivity at a genome-wide level (odds ratio, 2.96; P = 4.1 × 10−9). No association with HLA-DRB1∗10:01 was identified in 268 patients with delayed hypersensitivity reactions to β-lactams.

Conclusions

HLA-DRB1∗10:01 predisposed to immediate hypersensitivity reactions to penicillins. Further work to identify other predisposing HLA and non-HLA loci is required.

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Key words : Type I hypersensitivity, β-lactams, penicillins, cephalosporins, allergy, anaphylaxis, pharmacogenomics

Abbreviations used : BL, OR, QTL, SNP


Plan


 This work was supported by the International Serious Adverse Events Consortium (iSAEC). The iSAEC is a nonprofit organization dedicated to identifying and validating DNA variants useful in predicting the risk of drug-related serious adverse events. The iSAEC brings together the pharmaceutical industry, regulatory authorities, and academic centers to address clinical and scientific issues associated with the genetics of drug-related serious adverse events. The iSAEC’s funding members included: Abbott, Amgen, AstraZeneca, Daiichi Sankyo, GlaxoSmithKline, Merck, Novartis, Pfizer, Takeda, and the Wellcome Trust. M.P. is a National Institute for Health Research Senior Investigator. M.P. and D.F.C. thank the Medical Research Council (MRC) Centre for Drug Safety Science for support (MR/L006758/1). P.N. was supported by the iSAEC. E.J.P. receives funding from the National Institutes of Health (grants 1P50GM115305-01, R21AI139021, R34AI136815, and 1 R01 HG010863-01) and the National Health and Medical Research Council of Australia. The views expressed are those of the author(s) and not of any of their funders. The funders played no role in the analysis of the data and interpretation of the findings.
 Disclosure of potential conflict of interest: P. Nicoletti is an employee of Sema4, a Mount Sinai venture. M.R. Nelson was an employee of GlaxoSmithKline at the time the work was undertaken. M. Pirmohamed receives research funding from various organizations including the MRC, National Institute for Health Research, European Union Commission, and Health Education England. He has also received partnership funding for the following: MRC Clinical Pharmacology Training Scheme (cofunded by MRC and Roche, UCB, Eli Lilly, and Novartis); a PhD studentship jointly funded by Engineering and Physical Sciences Research Council, and AstraZeneca; and grant funding from Vistagen Therapeutics. He also has unrestricted educational grant support for the UK Pharmacogenetics and Stratified Medicine Network from Bristol Myers Squibb and UCB. He has developed an HLA genotyping panel with MC Diagnostics, but does not benefit financially from this. None of the funding declared above has been used for the current paper. The rest of the authors declare that they have no relevant conflicts of interest.


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Vol 147 - N° 5

P. 1830 - mai 2021 Retour au numéro
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